Composition and predicted functions of dairy cattle's endometrial and rumen microbiome against the background of chronic endometritis

Keywords: endometritis, endometrium, rumen, microbiome, dairy cattle

Abstract

Background. Scientific basis. Endometritis is one of the most important causes of dairy cattle maleness, leading to significant economic losses in animal husbandry. The composition of the microbiome of cattle has a direct impact on their reproductive health.

Purpose. Assess study purposes was to evaluate changes in the composition and predicted metabolic pathways of the endometrial and rumen microbiota of cattle with chronic endometritis.

Materials and methods. For the experiment two groups of cows were formed during the milking period (n = 3): control group I - clinically healthy, as well as with good reproduction indicators in the anamnesis of life, experimental group II - with chronic endometritis. The composition of the microbial community of endometrial scraping and rumen chyme was assessed using targeted NGS sequencing. Reconstruction and prediction of the functional content of gene and enzyme families were carried out using the PICRUSt2 software package (v.2.3.0).

Results. In the rumen of cattle of experimental group II, compared with control I, a decrease in the number of Ruminococcus sp. was noted and Veillonella sp. by 2.0 and 2.8 times, respectively, against the background of an increase in Fusobacterium sp. and bacteria of the order Bacteroidales – genera Bacteroides and Porphyromonas by 1,7-2,6 times (P<0.05).

A sharp (by 8.6%) increase in the number of Fusobacterium sp. (P<0.05) was noted in the endometrium of cattle of experimental group II compared with control I. In the endometrial microbiota, against the background of the disease, there was complete suppression of important pathways associated with the synthesis of vitamins, such as menaquinol-10 and biotin, as well as coenzyme Q10 (ubiquinols-7-10) associated with antioxidant activity compared to control group I (P<0.05).

Conclusion. Our findings indicate that chronic endometritis in cattle appear as a mixed infection, the etiological origin of which, in possibility, is an increase in the number of microorganisms present in the reproductive system of clinically healthy cows. The results of our study provide additional information about the mechanisms of development of chronic endometritis in cattle.

EDN: QWWMIL

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Author Biographies

Elena A. Yildirim, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

Doctor of Biological Sciences, Professor of the Department of Large Livestock Husbandry

Valentina A. Filippova, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

Head of the Laboratory of the Department of Large Animal Husbandry

Larisa A. Ilina, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

Doctor of Biological Sciences, Professor of the Department of Large Animal Husbandry

Georgy Yu. Laptev, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

Doctor of Biological Sciences; Director

Andrey V. Dubrovin, BIOTROF+ Ltd.

Candidate of Veterinary Sciences, Biotechnologist of the Molecular Genetic Laboratory

Vasily A. Zaikin, BIOTROF+ Ltd.

Biotechnologist of the Molecular Genetic Laboratory

Ksenia A. Kalitkina, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

Graduate Student of the Faculty of Animal Engineering and Biotechnology

Elena A. Korochkina, Saint-Petersburg State University of Veterinary Medicine

Associate Professor of Obstetrics and Operative Surgery

Irina A. Klyuchnikova, St. Petersburg State Agrarian University; BIOTROF+ Ltd.

master's student at the Faculty of Animal Engineering and Biotechnology

Ekaterina S. Ponomareva, BIOTROF+ Ltd.

Biotechnologist of the Molecular Genetic Laboratory

Evgeny A. Brazhnik, BIOTROF+ Ltd.

Quality Controller

Tatyana S. Smetannikova, Incorporated society «Gatchinskoye»

Head Animal Breeding Specialist

Daria G. Tyurina, BIOTROF+ Ltd.

Head Biotechnologist of the Molecular Genetic Laboratory

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Published
2025-02-28
How to Cite
Yildirim, E., Filippova, V., Ilina, L., Laptev, G., Dubrovin, A., Zaikin, V., Kalitkina, K., Korochkina, E., Klyuchnikova, I., Ponomareva, E., Brazhnik, E., Smetannikova, T., & Tyurina, D. (2025). Composition and predicted functions of dairy cattle’s endometrial and rumen microbiome against the background of chronic endometritis. Siberian Journal of Life Sciences and Agriculture, 17(1), 26-49. https://doi.org/10.12731/2658-6649-2025-17-1-1042
Section
Human and Animal Physiology